Mechanistic spatially-explicit eco-evolutionary biodiversity modelling

Status

Location

Course Dates

Target group

Max. number of participants / Credit Points

The registration is closed

iDiv Leipzig, room Beehive/excursion

14-18 November 2022,
9 am - 5 pm
voluntary excursion on 16 Nov

Doctoral and postdoctoral researchers familiar with the gen3sis R-package or with a pressing problem that can be addressed with this tool

15/2.5


Content

Pioneer naturalists such as Whewell, Lyell, Humboldt, Darwin and Wallace acknowledged the interactions between ecological and evolutionary forces, as well as the roles of continental movement, mountain formation and climate variations, in shaping biodiversity patterns. Studies show that linking these processes is necessary to reproduce multiple large-scale biodiversity patterns simultaneously. Recent developments in computer modelling and paleo-environmental reconstruction make it possible to study in silico how biodiversity emerges from eco-evolutionary and environmental dynamic processes and their interactions. This course aims to develop skills required to simulate emergent biodiversity using gen3sis engine, consequently enabling you to design experiments and analyze multiple interconnected hypotheses existing in a largely fragmented scientific landscape.

Competencies gained:

  • create new landscapes and eco-evolutionary rules
  • conduct simulation experiments (full modeling cycle) and reflect about emergent patterns
  • gain knowledge on how to apply and how not to apply such tools, as well as be familiar with its limitations and potentials

Prior knowledge:

  • Good programming, data-manipulation (e.g. list and raster) and data-visualization skills in R.
  • Good English communication skills.
  • Additionally, you will have to read three papers and go though one tutorial before coming to the course (these will be sent to you after the registration)

Find here the syllabus with all information on the course including reading material.


Lecturers

Dr Oskar Hagen

... is an iDiv postdoc and has developed gen3sis over the last six years.

 

Dr Benjamin Rosenbaum

... did his PhD in Applied Mathematics and is a postdoc in the ‘Theory in Biodiversity’ group. He has several years of experience in ecological modeling as well as math and stats consultation.

Dr Alexander Skeels

... is experienced with gen3sis and machine learning methods.

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